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DMT-2′O-Methyl-rG(ib) Phosphoramidite

SIGMA/G211150 - configured for (ÄKTA® and OligoPilot®)

Synonym: DMT-2′-O-Me-rG(ib) amidite; N-(2-methyl-1-oxopropyl)-5′-O-[bis(4-methoxyphenyl)phenylmethyl]-2′-O-methyl-guanosine, 3′-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]

CAS Number: 150780-67-9
Empirical Formula (Hill Notation): C45H56N7O9P
Molecular Weight: 869.94
MDL Number: MFCD00792625
Linear Formula: C45H56N7O9P
Product Type: Chemical

Catalog Number PKG Qty. Price Quantity
45-G211150-5G 5 g
$451.00
1/EA
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45-G211150-10G 10 g
$902.00
1/EA
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λ conforms (UV/VIS Identity)
assay ≥99% (31P-NMR)
  ≥99.0% (reversed phase HPLC)
biological source non-animal source (no BSE/TSE risk)
color white to off-white
compatibility configured for (ÄKTA® and OligoPilot®)
form powder
impurities ≤0.1% single unspecified Impurity (reversed phase HPLC)
  ≤0.3% mG2 (reversed phase HPLC, Hydrolysate)
  ≤0.3% mG3 (reversed phase HPLC, DMT-rG(ib)me)
  ≤0.3% water content (Karl Fischer)
  ≤0.5% P(III) Impurities 100-169ppm (31P-NMR)
  ≤1.0% mG1 (reversed phase HPLC, DMT-rG(ib)me-DMT)
  ≤3% residual Solvent content
InChI 1S/C45H56N7O9P/c1-28(2)41(53)49-44-48-40-37(42(54)50-44)47-27-51(40)43-39(57-9)38(61-62(59-25-13-24-46)52(29(3)4)30(5)6)36(60-43)26-58-45(31-14-11-10-12-15-31,32-16-20-34(55-7)21-17-32)33-18-22-35(56-8)23-19-33/h10-12,14-23,27-30,36,38-39,43H,13,25-26H2,1-9H3,(H2,48,49,50,53,54)/t36-,38-,39-,43-,62?/m1/s1
InChI key IRRDHRZUOZNWDJ-MLLDKZSOSA-N
nucleoside profile base: guanosine
base protecting group: isobutyryl
2' protecting group: methyl
5' protecting group: DMT
deprotection: standard
product line Proligo Reagents
Quality Level 300 
SMILES string CO[C@@H]1[C@H](OP(OCCC#N)N(C(C)C)C(C)C)[C@@H](COC(c2ccccc2)(c3ccc(OC)cc3)c4ccc(OC)cc4)O[C@H]1n5cnc6C(=O)NC(NC(=O)C(C)C)=Nc56
storage temp. -10 to -25°C
suitability conforms to structure for H-NMR
  conforms to structure for LC-MS
technique(s) oligo synthesis: suitable
General description: Proligo′s 2′O-Methyl RNA monomers are compatible with fast deprotectionschemes that are based on the application of aliphatic amines, such asmethylamine. The adenosine and guanosine monomers are protected bythe standard benzoyl (bz) and isobutyryl (ib) groups.2′O-Methyl RNA is a nucleic acid analog that is characterized by theexceptional hybridization properties that it imparts with complimentaryDNA or RNA, as well as increased stability against enzymatic degradationcompared to natural nucleic acids.The unique combination of properties of 2′O-Methyl RNA had foundwidespread use in the fields of:• Diagnostic probes
• Aptamer and ribozyme development
• Mixed 2′O-Methyl-RNA/DNA antisense molecules
Key Features:• High yield of crude oligonucleotides
• Compatible with DNA synthesis
• Can be employed together with DNA or RNA phosphoramidites in thesame synthesis to produce mixmer oligonucleotides
• Recommended deprotection conditions are 8 hours at 55 °C usingconcentrated ammonia solution, or with AMA (concentrated ammonia/40% aqueous methylamine I/I, v/v) for 10 minutes at 65 °C
• Purification and other downstream processing of fully modified 2′OMethyl RNA oligonucleotides are simpler than in the case of RNA, as nospecial precautions are required to provide protection against nucleolyticdegradationDMT-2′O-Methyl-rG(ib)
Phosphoramidite is configured for ÄKTA® Synthesizers.
Legal Information: ÄKTA is a registered trademark of Cytiva
Legal Information: OligoPilot is a registered trademark of Cytiva
RIDADR NONH for all modes of transport
WGK Germany WGK 3
Flash Point(F) Not applicable
Flash Point(C) Not applicable
Purity ≥99% (31P-NMR); ≥99.0% (reversed phase HPLC)
Storage Temp. -10 to -25°C
UNSPSC 41116105

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